usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 24.2475862068965 35.6281034482759 7.33886206896552
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1457
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 730
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 724
Number of spheres polar: 213, nonpolar: 312, out of current total: 724
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 14.26819 34.23105 26.14856 45.54927 -2.63325 17.26008
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 442
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 382
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 346
Spheres center of coords (x y z): 25.0542073410404 33.689326734104 5.91835884393064
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.77496878987269
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 29