usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): -6.33754838709678 0.841967741935484 8.29254838709677
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1213
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 750
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 743
Number of spheres polar: 190, nonpolar: 323, out of current total: 743
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -15.89070 3.63745 -9.15296 10.71454 -1.61716 18.23204
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 469
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 405
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 353
Spheres center of coords (x y z): -6.35272849858357 2.21898634560906 7.20202362606233
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.0707572495961
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 31