usefragsph not on
There are 45 ligand heavy atoms
Ligand center of coords (x y z): 14.5308666666667 -4.21982222222222 13.4448
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2199
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1062
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1060
Number of spheres polar: 314, nonpolar: 522, out of current total: 1060
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.53580 24.47126 -14.20162 5.74969 3.48231 23.16409
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 558
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 486
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 473
Spheres center of coords (x y z): 13.6221647780127 -4.20493852008456 14.1013087526427
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.49069867971689
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 45