usefragsph not on
There are 40 ligand heavy atoms
Ligand center of coords (x y z): 25.7781 37.609375 85.30465
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1238
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 672
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 667
Number of spheres polar: 178, nonpolar: 281, out of current total: 667
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.81704 35.76424 27.81243 47.52179 75.30820 95.25750
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 280
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 240
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 198
Spheres center of coords (x y z): 26.8580344444445 39.5226942424242 86.1040881818182
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.01242764449176
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 40