usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): -6.66205405405405 -0.0489189189189189 -7.08759459459459
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1290
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 733
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 733
Number of spheres polar: 165, nonpolar: 354, out of current total: 733
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -16.56752 3.31203 -9.95912 9.89953 -16.96900 2.32187
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 297
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 250
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 214
Spheres center of coords (x y z): -7.0242658411215 -2.39064602803738 -6.08962845794393
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.14028154992025
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 37