usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 25.9416333333333 38.7035 84.261
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1241
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 742
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 737
Number of spheres polar: 190, nonpolar: 337, out of current total: 737
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 15.96547 35.92078 28.87421 48.51200 74.29388 94.22030
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 441
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 385
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 339
Spheres center of coords (x y z): 26.0609713274336 39.7598701769912 85.8266896165192
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.46697796172829
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 30