There are 30 ligand heavy atoms
Ligand center of coords (x y z): 25.9416333333333 38.7035 84.261
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 12248
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 8419
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 8419
Number of spheres polar: 5027, nonpolar: 2708, out of current total: 8419
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 13.94460 37.93880 26.70900 50.68620 72.26600 96.24480
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1042
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 660
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 655
Spheres center of coords (x y z): 28.295758167939 37.7917029007633 84.6265163358778
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 9.61228215356482
Final number of output spheres is: 120
Number of polar spheres: 58
Number of nonpolar spheres: 54
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 30