usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): 27.9175263157895 1.23378947368421 0.786842105263157
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1258
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 783
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 783
Number of spheres polar: 378, nonpolar: 322, out of current total: 783
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.96345 37.88341 -8.76020 11.19762 -9.12200 10.34539
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 226
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 163
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 131
Spheres center of coords (x y z): 28.6041761068702 5.57765320610687 0.935539465648854
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.46520993310558
Final number of output spheres is: 45
Number of polar spheres: 19
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 19