usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 10.5029583333333 40.254 68.2570833333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1311
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 680
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 680
Number of spheres polar: 249, nonpolar: 347, out of current total: 680
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 0.55910 20.45467 30.36446 49.90292 58.30978 78.21506
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 199
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 165
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 134
Spheres center of coords (x y z): 13.4521601492537 42.0307782089552 70.9012354477612
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.02332522348217
Final number of output spheres is: 45
Number of polar spheres: 22
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 24