usefragsph not on
There are 21 ligand heavy atoms
Ligand center of coords (x y z): 9.65590476190476 39.4819047619048 67.8120952380952
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1404
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 680
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 680
Number of spheres polar: 303, nonpolar: 333, out of current total: 680
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -0.33472 19.56842 29.50383 49.43663 58.58734 77.79803
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 311
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 268
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 197
Spheres center of coords (x y z): 12.5813167005076 41.1105269543147 69.9380169035533
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.74903323630635
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 21