usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 28.10405 -1.40105 -0.62205
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1467
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 795
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 795
Number of spheres polar: 320, nonpolar: 378, out of current total: 795
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 18.23397 38.09048 -11.34344 8.57957 -10.04777 9.29994
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 214
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 164
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 133
Spheres center of coords (x y z): 28.5797422556391 -6.11061315789474 -0.447060751879699
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.89206380335251
Final number of output spheres is: 45
Number of polar spheres: 20
Number of nonpolar spheres: 20
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 20