There are 12 ligand heavy atoms Ligand center of coords (x y z): 30.62975 1.18866666666667 -0.309833333333333 useligsph not on Starting number of spheres from sph/sph cluster 0: 966 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 822 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 822 Number of spheres polar: 399, nonpolar: 329, out of current total: 822 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 18.65970 40.17849 -10.45283 13.15136 -11.78063 11.56194 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 209 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 164 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 30.62975 1.18866666666667 -0.309833333333333 Center point: 118 xyz: 30.69942 1.38339 -0.09626 After continuity checking, number of spheres is: 114 Final number of output spheres is: 114 Number of polar spheres: 45 Number of nonpolar spheres: 44 Number of spheres that are near neither polar nor nonpolar receptor atoms: 25 Final number of spheres that are from crystallographic ligand: 0