There are 10 ligand heavy atoms Ligand center of coords (x y z): 23.9711 -1.3049 -3.9236 useligsph not on Starting number of spheres from sph/sph cluster 0: 998 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 788 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 786 Number of spheres polar: 382, nonpolar: 340, out of current total: 786 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 12.00879 35.96248 -13.05495 10.53315 -15.80377 8.02386 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 252 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 190 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 23.9711 -1.3049 -3.9236 Center point: 126 xyz: 23.59616 -1.33100 -3.57506 After continuity checking, number of spheres is: 79 Final number of output spheres is: 79 Number of polar spheres: 36 Number of nonpolar spheres: 40 Number of spheres that are near neither polar nor nonpolar receptor atoms: 3 Final number of spheres that are from crystallographic ligand: 0