There are 23 ligand heavy atoms Ligand center of coords (x y z): 10.321652173913 39.950347826087 68.0464782608696 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 12471 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9630 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9630 Number of spheres polar: 6295, nonpolar: 2561, out of current total: 9630 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.65680 22.31900 27.95600 50.72760 57.25520 80.04620 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 634 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 353 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 282 Spheres center of coords (x y z): 12.1172687943262 43.1428 71.7450418439716 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 8.8018389744099 Final number of output spheres is: 120 Number of polar spheres: 83 Number of nonpolar spheres: 33 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 23