usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 233.385183703704 79.4497037037037 183.87911
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1102
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 758
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 758
Number of spheres polar: 265, nonpolar: 317, out of current total: 758
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 223.39240 243.38503 69.60162 89.36444 174.01273 193.85094
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 412
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 352
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 307
Spheres center of coords (x y z): 233.572993648208 77.5522022149837 184.537488957655
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.86772251301547
Final number of output spheres is: 60
Number of polar spheres: 26
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 27