There are 24 ligand heavy atoms Ligand center of coords (x y z): 63.16525 58.5230833333333 -2.0005 useligsph not on Starting number of spheres from sph/sph cluster 0: 1649 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 856 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 856 Number of spheres polar: 318, nonpolar: 446, out of current total: 856 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 51.17957 75.15643 46.54348 70.51725 -13.93141 9.97432 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 353 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 242 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 63.16525 58.5230833333333 -2.0005 Center point: 31 xyz: 63.19734 58.87458 -1.51072 After continuity checking, number of spheres is: 58 Final number of output spheres is: 58 Number of polar spheres: 19 Number of nonpolar spheres: 32 Number of spheres that are near neither polar nor nonpolar receptor atoms: 7 Final number of spheres that are from crystallographic ligand: 0