usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 0.193282051282051 8.12176923076923 54.5795641025641
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2065
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1000
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1000
Number of spheres polar: 253, nonpolar: 557, out of current total: 1000
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.78870 10.18254 -1.77077 18.11804 44.62284 64.43400
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 538
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 471
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 435
Spheres center of coords (x y z): 3.13967917241379 8.09292422988506 53.0375377471264
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.6842010822774
Final number of output spheres is: 60
Number of polar spheres: 20
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 39