usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): 0.624666666666667 6.57338888888889 56.1959722222222
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1750
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 967
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 967
Number of spheres polar: 219, nonpolar: 616, out of current total: 967
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -9.34349 10.61872 -3.37860 16.46653 46.21343 66.11716
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 308
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 266
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 237
Spheres center of coords (x y z): 4.74925506329114 6.1105164556962 55.2383858227848
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.74987343895627
Final number of output spheres is: 45
Number of polar spheres: 12
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 36