usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 20.0536551724138 11.2981724137931 58.0836551724138
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1258
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 695
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 693
Number of spheres polar: 204, nonpolar: 387, out of current total: 693
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 10.06388 29.86638 1.51300 21.18100 48.09624 68.04426
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 207
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 171
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 133
Spheres center of coords (x y z): 17.6897082706767 9.46275353383459 59.979314962406
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.08837503445877
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 29