usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): -12.9755555555556 13.1954814814815 40.5615925925926
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1381
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 815
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 814
Number of spheres polar: 253, nonpolar: 361, out of current total: 814
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -22.97162 -3.01818 3.25883 23.17216 30.61923 50.35956
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 443
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 380
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 338
Spheres center of coords (x y z): -11.6008181065089 16.1908510946745 41.5668997633136
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.99650087383744
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 27