usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 6.42892 -4.37184 16.44396
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1445
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 759
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 759
Number of spheres polar: 253, nonpolar: 307, out of current total: 759
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.56112 16.35515 -14.36859 5.58965 6.44693 26.31382
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 422
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 360
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 307
Spheres center of coords (x y z): 7.65234055374593 -7.80251954397394 14.5135853745928
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.93523902423822
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 25