usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 7.43525 8.39421428571429 43.1465714285714
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1549
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 771
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 770
Number of spheres polar: 225, nonpolar: 308, out of current total: 770
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.55690 17.29360 -1.57800 18.38073 33.15223 53.10117
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 447
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 383
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 355
Spheres center of coords (x y z): 5.52106850704225 11.5108543943662 41.8717327605634
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.68748397955897
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 28
Number of spheres that are near neither polar nor nonpolar receptor atoms: 15
Final number of spheres that are from crystallographic ligand: 28