usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 15.4738076923077 38.5356538461538 44.3925
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1557
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 714
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 711
Number of spheres polar: 212, nonpolar: 294, out of current total: 711
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 5.49075 25.44668 28.58758 48.49936 34.40325 54.39140
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 414
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 348
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 292
Spheres center of coords (x y z): 14.3497129794521 41.0343516438356 41.8718121232877
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.10173586247884
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 26