usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): -13.5275483870968 14.1279032258065 39.9593870967742
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1350
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 873
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 873
Number of spheres polar: 276, nonpolar: 399, out of current total: 873
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -23.52389 -3.55037 4.14781 23.96197 29.97674 49.87534
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 286
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 238
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 201
Spheres center of coords (x y z): -11.388135920398 16.7675649751244 41.8040505472637
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.60985750319812
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 31