usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): -13.5275483870968 14.1279032258065 39.9593870967742
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1350
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 873
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 873
Number of spheres polar: 276, nonpolar: 399, out of current total: 873
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -23.52389 -3.55037 4.14781 23.96197 29.97674 49.87534
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 477
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 414
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 360
Spheres center of coords (x y z): -11.6659716944444 16.3517327777778 41.5452745555555
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.36434368750707
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 31