usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): 8.65058333333334 35.8636944444445 11.95625
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1438
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 809
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 805
Number of spheres polar: 134, nonpolar: 458, out of current total: 805
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -1.32097 18.64759 25.98143 45.85783 2.01684 21.92884
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 453
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 381
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 350
Spheres center of coords (x y z): 9.90978434285714 35.3085784571428 13.2853038571429
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.10336265819584
Final number of output spheres is: 60
Number of polar spheres: 8
Number of nonpolar spheres: 51
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 36