usefragsph not on
There are 35 ligand heavy atoms
Ligand center of coords (x y z): 2.72422857142857 -0.9562 21.3384571428571
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1535
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 902
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 902
Number of spheres polar: 293, nonpolar: 383, out of current total: 902
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.83556 12.69749 -10.95033 9.03838 11.38295 31.16477
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 286
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 235
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 199
Spheres center of coords (x y z): 1.32237010050251 -3.17719185929648 22.0739479899498
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.72922358910937
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 35