usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 3.3249696969697 -1.09048484848485 21.7056363636364
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1719
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 995
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 994
Number of spheres polar: 214, nonpolar: 490, out of current total: 994
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.67118 13.31827 -11.08633 8.88174 11.78426 31.70039
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 341
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 292
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 245
Spheres center of coords (x y z): 2.40108273469388 -2.21443208163265 23.4952114285714
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.35569141089735
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 33