usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 43.7839130434783 30.8624782608696 30.8819565217391
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1182
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 817
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 814
Number of spheres polar: 241, nonpolar: 386, out of current total: 814
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 34.05752 53.74427 20.89218 40.85901 20.88891 40.64629
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 458
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 399
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 350
Spheres center of coords (x y z): 44.9247970571429 29.3755602 31.949239
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.67286446389466
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 42
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 23