usefragsph not on
There are 39 ligand heavy atoms
Ligand center of coords (x y z): 33.1465384615385 34.7609230769231 16.3199230769231
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2307
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 939
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 926
Number of spheres polar: 194, nonpolar: 626, out of current total: 926
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 23.40088 42.57121 24.78983 44.68702 6.34213 26.31726
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 501
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 430
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 397
Spheres center of coords (x y z): 31.5692972040302 31.5567972040302 16.6629972040302
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.83434854147477
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 47
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 39