usefragsph not on
There are 33 ligand heavy atoms
Ligand center of coords (x y z): 44.8082424242424 32.3246666666667 31.1808181818182
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1542
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 663
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 660
Number of spheres polar: 153, nonpolar: 318, out of current total: 660
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 34.81549 54.76631 22.32669 42.32277 21.28770 41.14471
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 258
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 217
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 187
Spheres center of coords (x y z): 46.7530324064171 30.3013480213904 31.0203029411765
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.81975291203108
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 33