usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 6.05216 14.55196 35.75376
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1894
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1150
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1150
Number of spheres polar: 397, nonpolar: 643, out of current total: 1150
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.90391 15.65120 4.56372 24.53434 25.78445 45.75290
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 544
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 458
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 405
Spheres center of coords (x y z): 5.00456716049382 16.1520806419753 34.604028691358
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.58231237921978
Final number of output spheres is: 60
Number of polar spheres: 22
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 25