usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): 2.39854166666667 11.5855416666667 30.7624583333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1660
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 813
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 805
Number of spheres polar: 255, nonpolar: 432, out of current total: 805
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.59802 12.30693 1.59195 21.55740 20.76612 40.52303
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 434
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 375
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 318
Spheres center of coords (x y z): -0.181208710691825 12.6170279874214 29.5127399371069
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.44267554821656
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 24