usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 12.4313703703704 -0.755888888888889 30.498
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2043
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 910
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 910
Number of spheres polar: 245, nonpolar: 534, out of current total: 910
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 2.46856 22.41753 -10.70892 9.16188 20.65271 40.46546
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 269
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 229
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 186
Spheres center of coords (x y z): 10.9437890860215 1.58929704301075 32.4600247311828
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.79231383174339
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 27