usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): -2.98025 -0.952678571428571 23.0424285714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1242
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 822
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 822
Number of spheres polar: 261, nonpolar: 347, out of current total: 822
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.97478 6.87570 -10.91300 9.00055 13.16002 33.00645
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 301
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 249
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 218
Spheres center of coords (x y z): -1.27309866972477 -1.52656871559633 25.2671166513761
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.52905967957767
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 25
Number of spheres that are near neither polar nor nonpolar receptor atoms: 10
Final number of spheres that are from crystallographic ligand: 28