usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 44.5346923076923 33.1666538461538 30.1245
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1121
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 659
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 650
Number of spheres polar: 172, nonpolar: 262, out of current total: 650
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 34.58625 54.52168 23.17380 43.15743 20.13798 39.97934
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 398
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 360
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 294
Spheres center of coords (x y z): 46.1821564965986 32.1567645238095 30.4294924489796
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.45811973850446
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 33
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 26