There are 30 ligand heavy atoms Ligand center of coords (x y z): 43.3549 31.6077 30.8649666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 1626 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1187 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1176 Number of spheres polar: 350, nonpolar: 589, out of current total: 1176 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 31.39113 55.13591 19.60997 43.57042 18.87847 42.84351 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 437 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 339 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 43.3549 31.6077 30.8649666666667 Center point: 303 xyz: 43.08588 31.85893 30.86426 After continuity checking, number of spheres is: 256 Spheres center of coords (x y z): 45.3418198828125 30.46994375 29.413305546875 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 40.9057226224783 27.5652665706052 36.788211815562 Average weighted-distance for final elimination is: 29.5510194639038 Final number of output spheres is: 120 Number of polar spheres: 39 Number of nonpolar spheres: 54 Number of spheres that are near neither polar nor nonpolar receptor atoms: 27 Final number of spheres that are from crystallographic ligand: 0