usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): 42.259054054054 30.9492702702703 34.475972972973
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2139
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1061
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1061
Number of spheres polar: 295, nonpolar: 646, out of current total: 1061
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.25990 52.24249 20.95333 40.85963 26.58242 43.95461
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 314
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 256
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 219
Spheres center of coords (x y z): 42.8465578082192 28.2718380365297 34.3939212328767
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.33806146324334
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 37