usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 21.6022068965517 10.3207586206897 31.5826206896552
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1404
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 794
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 794
Number of spheres polar: 205, nonpolar: 399, out of current total: 794
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 12.00507 31.59524 0.35375 20.31914 21.68103 41.55375
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 454
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 393
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 357
Spheres center of coords (x y z): 22.323481372549 10.7477771988796 30.1247099439776
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.26102835329849
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 41
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 29