usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): -1.49618421052632 -3.26773684210526 -17.3886842105263
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 2305
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1217
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1216
Number of spheres polar: 356, nonpolar: 689, out of current total: 1216
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.45200 6.80099 -13.25756 6.72928 -27.35065 -7.40941
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 332
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 281
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 269
Spheres center of coords (x y z): -0.555908141263941 -7.08431840148699 -18.2141342379182
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.95043405813413
Final number of output spheres is: 45
Number of polar spheres: 13
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 38