usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 42.3913076923077 31.4536153846154 33.2402692307692
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1509
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 623
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 623
Number of spheres polar: 194, nonpolar: 262, out of current total: 623
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.43814 52.37128 21.46046 41.44243 23.46076 43.02335
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 366
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 314
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 247
Spheres center of coords (x y z): 45.6795813765182 29.9108186639676 32.1084182186235
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.58499290346425
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 26