usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): -2.15814814814815 -0.944592592592593 -20.2655185185185
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1407
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 860
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 860
Number of spheres polar: 147, nonpolar: 486, out of current total: 860
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.06660 7.75480 -10.92856 9.05266 -30.24436 -10.35476
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 483
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 424
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 340
Spheres center of coords (x y z): -0.962063470588237 -2.398034 -21.5815510588235
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.65962173833755
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 27