usefragsph not on
There are 32 ligand heavy atoms
Ligand center of coords (x y z): -2.47184375 5.02009375 39.28503125
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1785
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 745
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 745
Number of spheres polar: 191, nonpolar: 410, out of current total: 745
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.46718 6.49137 -4.81547 14.94961 29.29847 49.26510
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 260
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 216
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 184
Spheres center of coords (x y z): -1.74193114130435 2.98318125 35.6018224456522
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.79314094228826
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 0
Final number of spheres that are from crystallographic ligand: 32