There are 40 ligand heavy atoms Ligand center of coords (x y z): -2.795175 -0.7886 24.303725 useligsph not on Starting number of spheres from sph/sph cluster 0: 1413 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1059 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1059 Number of spheres polar: 354, nonpolar: 460, out of current total: 1059 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.46599 9.18000 -12.74645 11.20566 12.30827 35.18168 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 388 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 323 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -2.795175 -0.7886 24.303725 Center point: 55 xyz: -4.00918 -1.01741 24.10041 After continuity checking, number of spheres is: 299 Spheres center of coords (x y z): -2.59734765886288 -1.45674461538462 25.4506803344482 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 1.73026686884003 1.94186429112964 15.5412524639879 Average weighted-distance for final elimination is: 32.8494073689354 Final number of output spheres is: 120 Number of polar spheres: 48 Number of nonpolar spheres: 48 Number of spheres that are near neither polar nor nonpolar receptor atoms: 24 Final number of spheres that are from crystallographic ligand: 0