usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 31.5629259259259 27.8888148148148 40.4862592592593
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1402
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 700
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 700
Number of spheres polar: 180, nonpolar: 394, out of current total: 700
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.56810 41.19206 17.97944 37.85465 30.49833 50.05738
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 374
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 323
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 288
Spheres center of coords (x y z): 28.6609117361111 28.5012715972222 37.1444229861111
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.24712007828049
Final number of output spheres is: 60
Number of polar spheres: 27
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 27