usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): 40.3743076923077 -13.8237307692308 5.43534615384615
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1802
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 917
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 917
Number of spheres polar: 204, nonpolar: 551, out of current total: 917
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.60281 50.35933 -23.76145 -3.84924 -4.51999 13.83284
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 530
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 441
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 405
Spheres center of coords (x y z): 41.8182276790123 -9.95411274074074 2.88855982716049
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.1366733221814
Final number of output spheres is: 60
Number of polar spheres: 31
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 2
Final number of spheres that are from crystallographic ligand: 26