usefragsph not on
There are 26 ligand heavy atoms
Ligand center of coords (x y z): -2.03830769230769 59.5865384615385 34.1718076923077
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1785
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 1007
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1007
Number of spheres polar: 268, nonpolar: 575, out of current total: 1007
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -12.02111 7.85379 49.61700 69.49298 24.31743 44.01592
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 542
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 467
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 425
Spheres center of coords (x y z): -6.85018625882353 58.5185354588235 34.0181601647059
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.49989908521058
Final number of output spheres is: 60
Number of polar spheres: 23
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 5
Final number of spheres that are from crystallographic ligand: 26