Enabling DOCK Developer Scripts incl Database Preparation Intel/Linux inactives we got past inactivesDB.ism actives we got past actives.ism node-6-11.c.bkslab.org du2 starts 1 molecule processed, 0 errors convert.py (MDL SDF -> Isomeric SMILES): mols in: 1 mols out: 1 Total: 1 mols processed. mol2nam v1.9 Structure to Name Conversion OpenEye Scientific Software, February 2009 convert.py (Tripos MOL2 -> Isomeric SMILES): mols in: 1 mols out: 1 Total: 1 mols processed. first try already in then inzinc count is 0 bzcat: Can't open input file 98: No such file or directory. bzcat: Can't open input file 12: No such file or directory. bzcat: Can't open input file 34: No such file or directory. bzcat: Can't open input file 72: No such file or directory. convert.py (Tripos MOL2 -> MDL SDF): mols in: 2 mols out: 2 Total: 2 mols processed. count is 0 nothing to compress bzcat: Can't open input file 98: No such file or directory. bzcat: Can't open input file 12: No such file or directory. bzcat: Can't open input file 34: No such file or directory. bzcat: Can't open input file 72: No such file or directory. nothing to compress du2.csh script updated ligand processing Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 143, in ? result = server.similars(smiles) File "/usr/lib64/python2.4/xmlrpclib.py", line 1096, in __call__ return self.__send(self.__name, args) File "/usr/lib64/python2.4/xmlrpclib.py", line 1383, in __request verbose=self.__verbose File "/usr/lib64/python2.4/xmlrpclib.py", line 1147, in request return self._parse_response(h.getfile(), sock) File "/usr/lib64/python2.4/xmlrpclib.py", line 1286, in _parse_response return u.close() File "/usr/lib64/python2.4/xmlrpclib.py", line 744, in close raise Fault(**self._stack[0]) xmlrpclib.Fault: MakeDOCK 2.0, modified by J.Irwin and M.Mysinger. Previous versions by D.M.Lorber, B.Q.Wei, A.N.Kirschner, and N.Huang Using scripts in /raid5/people/mysinger/xyz/dockenv. Creating binding-site residue list Creating molecular surface real 0m2.679s user 0m0.519s sys 0m0.258s Creating sphgen spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 0:1871 spheres. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 127. 128. 128. 128. 128. 128. 128. 129. 129. 129. 129. 130. 130. 130. 130. 130. 130. 130. 130. 130. 130. 130. 130. 130. 130. 130. 131. 132. 132. 161. 161. 161. 161. 161. 161. 163. 163. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 164. 165. 165. 319. 319. 319. 320. 322. 322. 322. 322. 322. 322. 322. 322. 322. 322. 322. 322. 322. 324. 325. 325. 325. 325. 325. 325. 325. 325. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 326. 327. 327. 327. 327. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 328. 330. 330. 330. 339. 339. 339. 339. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 341. 452. 452. 452. 455. 456. 456. 456. 464. 464. 464. 465. 465. 465. 465. 465. 465. 465. 465. 465. 465. 465. 465. 465. 465. 465. 469. 469. 470. 470. 470. 470. 470. 470. 470. 470. 472. 472. 473. 481. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 496. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 499. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 581. 602. 602. 604. 605. 605. 605. 605. 609. 609. 617. 617. 617. 617. 621. 621. 622. 622. 622. 624. 624. 624. 624. 624. 625. 625. 625. 625. 626. 626. 626. 626. 626. 628. 628. 628. 628. 628. 628. 630. 631. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 632. 633. 633. 633. 633. 633. 633. 633. 633. 633. 633. 633. 633. 633. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 640. 641. 645. 645. 645. 645. 645. 645. 645. 645. 645. 646. 646. 646. 646. 646. 646. 646. 646. 650. 650. 650. 655. 655. 655. 655. 655. 655. 655. 655. 655. 655. 655. 655. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 656. 657. 657. 657. 657. 657. 657. 657. 657. 657. 657. 657. 658. 658. 658. 658. 658. 658. 658. 658. 658. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 660. 666. 668. 668. 668. 668. 668. 668. 668. 670. 670. 670. 670. 670. 670. 670. 673. 673. 673. 673. 673. 674. 674. 674. 674. 674. 674. 674. 674. 674. 674. 675. 678. 679. 679. 680. 680. 691. 691. 692. 692. 692. 692. 692. 692. 692. 692. 692. 696. 696. 696. 697. 697. 697. 697. 697. 697. 697. 699. 699. 699. 699. 699. 699. 711. 711. 711. 712. 712. 713. 716. 716. 716. 716. 723. 723. 725. 725. 725. 733. 733. 733. 733. 733. 733. 733. 733. 733. 733. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 741. 743. 743. 746. 749. 749. 806. 806. 806. 806. 806. 806. 813. 813. 813. 813. 813. 813. 813. 813. 813. 813. 813. 813. 813. 814. 814. 814. 814. 821. 821. 821. 821. 821. 821. 821. 821. 821. 822. 822. 822. 822. 822. 822. 822. 834. 834. 834. 834. 834. 834. 835. 835. 835. 835. 835. 835. 835. 835. 836. 838. 842. 842. 843. 843. 843. 844. 844. 844. 845. 845. 845. 845. 845. 845. 845. 845. 846. 846. 849. 849. 850. 859. 859. 859. 859. 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STOP Converting ligand atoms to spheres Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 26 spheres. 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. 26.FORTRAN STOP Adding essential hydrogens to receptor Generating matching spheres for delphi Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 120 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.9061.9062.9063.9064.9065.9066.9067.9068.9069.9070.9071.9072.9073.9074.9075.9076.9077.9078.9079.9080.9081.9082.9083.9084.9085.9086.9087.9088.9089.9090.9091.9092.9093.9094.9095.9096.9097.9098.9099.9100.9101.9102.9103.9104.9105.9106.9107.9108.9109.9110.9111.9112.9113.9114.9115.9116.9117.9118.9119.9120.FORTRAN STOP Generating faster matching2 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 45 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.FORTRAN STOP Coloring matching spheres Generating slower matching3 spheres for docking Enter name of sphere cluster file: Enter cluster number to process (<0 = all): Generate surfaces as well as pdb files (/Y)? Enter name for output PDB file name: Cluster 1: 60 spheres. 9001.9002.9003.9004.9005.9006.9007.9008.9009.9010.9011.9012.9013.9014.9015.9016.9017.9018.9019.9020.9021.9022.9023.9024.9025.9026.9027.9028.9029.9030.9031.9032.9033.9034.9035.9036.9037.9038.9039.9040.9041.9042.9043.9044.9045.9046.9047.9048.9049.9050.9051.9052.9053.9054.9055.9056.9057.9058.9059.9060.FORTRAN STOP Coloring matching spheres Adding spheres to electrostatic grid Creating DelPhi electrostatic grid real 0m26.855s user 0m23.843s sys 0m0.690s Adding spheres to tarted electrostatic grid Creating DelPhi electrostatic grid real 0m26.789s user 0m23.987s sys 0m0.593s Creating box around spheres Creating chemgrid maps real 0m17.664s user 0m16.768s sys 0m0.202s Atomic solvent excluded volume calculations underway FORTRAN STOP real 27m50.248s user 27m49.479s sys 0m0.138s Checking for WARNINGS in OUTPARM. Checking for WARNINGS in delphi.log. !!! WARNING: LEU 314 has a net charge of 0.5000 !!! WARNING: ADP 315 has a net charge of -2.0000 !!! WARNING: LEU 314 has a net charge of 0.5000 !!! WARNING: ADP 315 has a net charge of -2.0000 !!! WARNING: LEU 314 has a net charge of 0.5000 !!! WARNING: ADP 315 has a net charge of -2.0000 End of MakeDOCK sphere and grid generation. Grid preparation completed normally. cat: .simjob: No such file or directory [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar [z]inc2smi or [c]atfile? Traceback (most recent call last): File "/raid5/people/mysinger/xyz/dockenv/etc/xmlclient.py", line 26, in ? flag = raw_input('[z]inc2smi or [c]atfile? ') EOFError: EOF when reading a line slept 360 waiting for similar failed to get similars