There are 26 ligand heavy atoms
Ligand center of coords (x y z): -1.38638461538462 58.1396538461539 33.1997307692308
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 18577
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 10901
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 10407
Number of spheres polar: 6441, nonpolar: 2605, out of current total: 10407
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -13.38540 10.61260 46.14640 70.13940 21.20240 45.19540
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1265
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 530
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 500
Spheres center of coords (x y z): -3.4372348 54.8613076 32.8178816
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 9.69663048046583
Final number of output spheres is: 120
Number of polar spheres: 70
Number of nonpolar spheres: 46
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 26