usefragsph not on
There are 16 ligand heavy atoms
Ligand center of coords (x y z): 11.254625 1.955875 23.778625
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1497
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 775
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 775
Number of spheres polar: 263, nonpolar: 356, out of current total: 775
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.31772 16.15718 -8.00665 11.92401 13.81607 33.73135
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 367
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 308
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 276
Spheres center of coords (x y z): 7.39708398550724 1.17936648550725 27.3849774637681
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.46210277395185
Final number of output spheres is: 60
Number of polar spheres: 15
Number of nonpolar spheres: 38
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 16